Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANS85827.1Uncharacterized protein; Cell membrane; Membrane; Transmembrane; Transmembrane helix. (531 aa)    
Predicted Functional Partners:
ANS88035.1
Uncharacterized protein.
  
     0.624
ANS85020.1
Putative sodium-dependent transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2. A. 22) family.
 
     0.422
ANS87015.1
Arginine/ornithine antiporter ArcD; Uptake of arginine from the medium in exchange for ornithine; Belongs to the NhaC Na(+)/H(+) (TC 2. A. 35) antiporter family.
  
   
 0.403
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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