STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS85916.1Cytochrome c-type protein NapC; Belongs to the TorC/TorY family. (394 aa)    
Predicted Functional Partners:
torA
Trimethylamine-N-oxide reductase (cytochrome c); Reduces trimethylamine-N-oxide (TMAO) into trimethylamin; an anaerobic reaction coupled to energy-yielding reactions; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family; KEGG: vch:VC1692 trimethylamine-N-oxide reductase (cytochrome c).
 
 0.996
torD
Chaperone protein TorD; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.
 
 
 0.951
ANS87637.1
Periplasmic nitrate reductase, electron transfer subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
 
  
 0.948
napA
Nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 
 0.942
ANS85095.1
Uncharacterized protein; Contains 3 4Fe-4S ferredoxin-type domains.
 
  
 0.917
napF
Ferredoxin-type protein; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.
 
  
 0.916
napD
Hypothetical protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
 
  
 0.876
nrfA
Nitrite reductase (cytochrome; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.
  
 
 0.800
dmsA
Dimethylsulfoxide reductase; Catalyzes the reduction of dimethyl sulfoxide (DMSO) to dimethyl sulfide (DMS). DMSO reductase serves as the terminal reductase under anaerobic conditions, with DMSO being the terminal electron acceptor. Terminal reductase during anaerobic growth on various sulfoxides and N-oxide compounds. Allows E. coli to grow anaerobically on DMSO as respiratory oxidant; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family; Contains 1 4Fe-4S Mo/W bis-MGD-type domain; KEGG: yel:LC20_03833 anaerobic dimethyl sulfoxide reductase subunit A.
 
 
 0.784
ANS86084.1
Cytochrome c-type protein NrfB; Plays a role in nitrite reduction.
  
 
 0.722
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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