Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANS84018.1 | ANS86010.1 | VSVS12_00194 | VSVS12_02249 | Putative chromosome-partitioning protein ParB; Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication (By similarity); Belongs to the ParB family. | Inhibits the initiation of sporulation, Spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of Spo0A. It is not required for chromosome partitioning (By similarity); Belongs to the ParA family. | 0.924 |
| ANS86007.1 | ANS86008.1 | VSVS12_02246 | VSVS12_02247 | Hypothetical protein. | Chemotaxis protein CheW; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors; Contains 1 cheW-like domain. | 0.832 |
| ANS86007.1 | ANS86009.1 | VSVS12_02246 | VSVS12_02248 | Hypothetical protein. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily; Contains 1 tr-type G (guanine nucleotide-binding) domain. | 0.915 |
| ANS86007.1 | ANS86010.1 | VSVS12_02246 | VSVS12_02249 | Hypothetical protein. | Inhibits the initiation of sporulation, Spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of Spo0A. It is not required for chromosome partitioning (By similarity); Belongs to the ParA family. | 0.770 |
| ANS86007.1 | ANS86013.1 | VSVS12_02246 | VSVS12_02252 | Hypothetical protein. | Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.802 |
| ANS86007.1 | ANS86014.1 | VSVS12_02246 | VSVS12_02253 | Hypothetical protein. | Chemotaxis protein; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. In its active (phosphorylated or acetylated) form, CheY exhibits enhanced binding to a switch component, FliM, at the flagellar motor which induces a change from counterclockwise to clockwise flagellar rotation (By similarity); Contains 1 response regulatory domain. | 0.552 |
| ANS86007.1 | ANS86016.1 | VSVS12_02246 | VSVS12_02255 | Hypothetical protein. | Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; In the N-terminal sectio; belongs to the MIP18 family; In the C-terminal sectio; belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.550 |
| ANS86007.1 | cheA | VSVS12_02246 | VSVS12_02251 | Hypothetical protein. | Histidine kinase; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylate; it can transfer its phosphate group to either CheB or CheY (By similarity); Contains 1 cheW-like domain; Contains 1 histidine kinase domain; Contains 1 HPt domain; KEGG: vch:VC2063 two-component system, chemotaxis family, sensor kinase CheA. | 0.692 |
| ANS86007.1 | cheB | VSVS12_02246 | VSVS12_02250 | Hypothetical protein. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.725 |
| ANS86008.1 | ANS86007.1 | VSVS12_02247 | VSVS12_02246 | Chemotaxis protein CheW; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors; Contains 1 cheW-like domain. | Hypothetical protein. | 0.832 |
| ANS86008.1 | ANS86009.1 | VSVS12_02247 | VSVS12_02248 | Chemotaxis protein CheW; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors; Contains 1 cheW-like domain. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily; Contains 1 tr-type G (guanine nucleotide-binding) domain. | 0.981 |
| ANS86008.1 | ANS86010.1 | VSVS12_02247 | VSVS12_02249 | Chemotaxis protein CheW; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors; Contains 1 cheW-like domain. | Inhibits the initiation of sporulation, Spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of Spo0A. It is not required for chromosome partitioning (By similarity); Belongs to the ParA family. | 0.735 |
| ANS86008.1 | ANS86013.1 | VSVS12_02247 | VSVS12_02252 | Chemotaxis protein CheW; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors; Contains 1 cheW-like domain. | Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.951 |
| ANS86008.1 | ANS86014.1 | VSVS12_02247 | VSVS12_02253 | Chemotaxis protein CheW; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors; Contains 1 cheW-like domain. | Chemotaxis protein; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. In its active (phosphorylated or acetylated) form, CheY exhibits enhanced binding to a switch component, FliM, at the flagellar motor which induces a change from counterclockwise to clockwise flagellar rotation (By similarity); Contains 1 response regulatory domain. | 0.977 |
| ANS86008.1 | ANS86016.1 | VSVS12_02247 | VSVS12_02255 | Chemotaxis protein CheW; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors; Contains 1 cheW-like domain. | Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; In the N-terminal sectio; belongs to the MIP18 family; In the C-terminal sectio; belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.589 |
| ANS86008.1 | cheA | VSVS12_02247 | VSVS12_02251 | Chemotaxis protein CheW; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors; Contains 1 cheW-like domain. | Histidine kinase; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylate; it can transfer its phosphate group to either CheB or CheY (By similarity); Contains 1 cheW-like domain; Contains 1 histidine kinase domain; Contains 1 HPt domain; KEGG: vch:VC2063 two-component system, chemotaxis family, sensor kinase CheA. | 0.999 |
| ANS86008.1 | cheB | VSVS12_02247 | VSVS12_02250 | Chemotaxis protein CheW; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors; Contains 1 cheW-like domain. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.994 |
| ANS86009.1 | ANS86007.1 | VSVS12_02248 | VSVS12_02246 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily; Contains 1 tr-type G (guanine nucleotide-binding) domain. | Hypothetical protein. | 0.915 |
| ANS86009.1 | ANS86008.1 | VSVS12_02248 | VSVS12_02247 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily; Contains 1 tr-type G (guanine nucleotide-binding) domain. | Chemotaxis protein CheW; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors; Contains 1 cheW-like domain. | 0.981 |
| ANS86009.1 | ANS86010.1 | VSVS12_02248 | VSVS12_02249 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily; Contains 1 tr-type G (guanine nucleotide-binding) domain. | Inhibits the initiation of sporulation, Spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of Spo0A. It is not required for chromosome partitioning (By similarity); Belongs to the ParA family. | 0.921 |
page 1 of 4