STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS86030.1Putative membrane protein in ycf23-apcF intergenic region; Belongs to the ABC-3 integral membrane protein family. (271 aa)    
Predicted Functional Partners:
znuC
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 
 0.999
ANS86028.1
Involved in the high-affinity zinc uptake transport system. Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.995
ANS85385.1
Putative membrane protein; Belongs to the NRAMP family.
   
  
 0.671
ANS86230.1
Part of the binding-protein-dependent transport system for phosphat; probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily; Contains 1 ABC transmembrane type-1 domain.
     
 0.580
fur
Zinc uptake regulation protein; Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB). Belongs to the Fur family.
 
  
 0.505
ANS86610.1
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily; Contains 1 PPIase FKBP-type domain.
  
  
 0.499
ANS86027.1
Hypothetical protein.
       0.464
ANS85464.1
Spermidine/putrescine transport system permease protein; Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine. Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily; Contains 1 ABC transmembrane type-1 domain.
     
 0.460
lptB
Lipopolysaccharide export system ATP-binding protein LptB; Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Probably responsible for energy coupling to the transport system (By similarity); Belongs to the ABC transporter superfamily. Outer membrane lipopolysaccharide export (TC 1. B. 42) family; Contains 1 ABC transporter domain; KEGG: vch:VC2528 lipopolysaccharide export system ATP-binding protein; Acting on acid anhydrides; catalyzing transmembrane movement of substances.
     
 0.458
ANS87060.1
Hypothetical protein.
  
  
  0.440
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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