STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS86169.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
ANS86166.1
Hypothetical protein.
  
  
 0.905
ANS86167.1
Hypothetical protein.
  
  
 0.882
ANS86170.1
Hypothetical protein.
 
  
 0.851
ANS86168.1
Hypothetical protein.
  
  
 0.784
ANS84255.1
Hypothetical protein.
 
  
 0.653
ANS84399.1
Hypothetical protein.
  
  
 0.559
ANS84254.1
Hypothetical protein.
 
  
 0.555
sbcB
Degrades single-stranded DNA (ssDNA) in a highly processive manner. Also functions as a DNA deoxyribophosphodiesterase that releases deoxyribose-phosphate moieties following the cleavage of DNA at an apurinic/apyrimidinic (AP) site by either an AP endonuclease or AP lyase; Contains 1 exonuclease C-terminal domain; Contains 1 exonuclease domain; KEGG: vch:VC1234 exodeoxyribonuclease I.
  
     0.503
ANS86165.1
P-aminobenzoyl-glutamate transport protein; Essential for aminobenzoyl-glutamate utilization. It catalyzes the concentration-dependent uptake of p-aminobenzoyl- glutamate (PABA-GLU) into the cell and allows accumulation of PABA-GLU to a concentration enabling AbgAB to catalyze cleavage into p-aminobenzoate and glutamate. It seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. May actually serve physiologically as a transporter for some other molecule, perhaps a dipeptide, and that it transports p-aminobenzoyl- glutamate as a secondary activity. The physiologi [...]
       0.462
ANS84256.1
Hypothetical protein.
  
  
 0.405
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.