Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANS84129.1 | ANS86222.1 | VSVS12_00312 | VSVS12_02462 | Beta-N-acetylhexosaminidase; Hydrolysis of terminal, non-reducing N-acetyl-beta-D- glucosamine residues in chitobiose and higher analogs, and in glycoproteins. Belongs to the glycosyl hydrolase 20 family; KEGG: awd:AWOD_II_1174 hexosaminidase. | Hypothetical protein. | 0.464 |
ANS84129.1 | ANS86801.1 | VSVS12_00312 | VSVS12_03092 | Beta-N-acetylhexosaminidase; Hydrolysis of terminal, non-reducing N-acetyl-beta-D- glucosamine residues in chitobiose and higher analogs, and in glycoproteins. Belongs to the glycosyl hydrolase 20 family; KEGG: awd:AWOD_II_1174 hexosaminidase. | Chitinase; Belongs to the glycosyl hydrolase 18 family. Chitinase class II subfamily; KEGG: scq:SCULI_v1c08220 chitinase. | 0.957 |
ANS84129.1 | ANS88019.1 | VSVS12_00312 | VSVS12_04320 | Beta-N-acetylhexosaminidase; Hydrolysis of terminal, non-reducing N-acetyl-beta-D- glucosamine residues in chitobiose and higher analogs, and in glycoproteins. Belongs to the glycosyl hydrolase 20 family; KEGG: awd:AWOD_II_1174 hexosaminidase. | Hypothetical protein. | 0.448 |
ANS84725.1 | ANS86222.1 | VSVS12_00937 | VSVS12_02462 | Hypothetical protein; Belongs to the UPF0319 family. | Hypothetical protein. | 0.413 |
ANS84725.1 | ANS88019.1 | VSVS12_00937 | VSVS12_04320 | Hypothetical protein; Belongs to the UPF0319 family. | Hypothetical protein. | 0.545 |
ANS85581.1 | ANS86222.1 | VSVS12_01815 | VSVS12_02462 | Uncharacterized protein; To H. influenzae HI_0521. | Hypothetical protein. | 0.435 |
ANS85581.1 | ANS88019.1 | VSVS12_01815 | VSVS12_04320 | Uncharacterized protein; To H. influenzae HI_0521. | Hypothetical protein. | 0.425 |
ANS86222.1 | ANS84129.1 | VSVS12_02462 | VSVS12_00312 | Hypothetical protein. | Beta-N-acetylhexosaminidase; Hydrolysis of terminal, non-reducing N-acetyl-beta-D- glucosamine residues in chitobiose and higher analogs, and in glycoproteins. Belongs to the glycosyl hydrolase 20 family; KEGG: awd:AWOD_II_1174 hexosaminidase. | 0.464 |
ANS86222.1 | ANS84725.1 | VSVS12_02462 | VSVS12_00937 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0319 family. | 0.413 |
ANS86222.1 | ANS85581.1 | VSVS12_02462 | VSVS12_01815 | Hypothetical protein. | Uncharacterized protein; To H. influenzae HI_0521. | 0.435 |
ANS86222.1 | ANS86223.1 | VSVS12_02462 | VSVS12_02463 | Hypothetical protein. | Trans-acting transcriptional regulator of RuBisCO genes (rbcAB) expression. Contains 1 HTH lysR-type DNA-binding domain; Belongs to the LysR transcriptional regulatory family. | 0.626 |
ANS86222.1 | ANS86801.1 | VSVS12_02462 | VSVS12_03092 | Hypothetical protein. | Chitinase; Belongs to the glycosyl hydrolase 18 family. Chitinase class II subfamily; KEGG: scq:SCULI_v1c08220 chitinase. | 0.479 |
ANS86222.1 | ANS88019.1 | VSVS12_02462 | VSVS12_04320 | Hypothetical protein. | Hypothetical protein. | 0.474 |
ANS86222.1 | gltS | VSVS12_02462 | VSVS12_03410 | Hypothetical protein. | Sodium/glutamate symport carrier protein; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. | 0.633 |
ANS86222.1 | recC | VSVS12_02462 | VSVS12_02461 | Hypothetical protein. | Exodeoxyribonuclease V; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzy [...] | 0.490 |
ANS86223.1 | ANS86222.1 | VSVS12_02463 | VSVS12_02462 | Trans-acting transcriptional regulator of RuBisCO genes (rbcAB) expression. Contains 1 HTH lysR-type DNA-binding domain; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.626 |
ANS86801.1 | ANS84129.1 | VSVS12_03092 | VSVS12_00312 | Chitinase; Belongs to the glycosyl hydrolase 18 family. Chitinase class II subfamily; KEGG: scq:SCULI_v1c08220 chitinase. | Beta-N-acetylhexosaminidase; Hydrolysis of terminal, non-reducing N-acetyl-beta-D- glucosamine residues in chitobiose and higher analogs, and in glycoproteins. Belongs to the glycosyl hydrolase 20 family; KEGG: awd:AWOD_II_1174 hexosaminidase. | 0.957 |
ANS86801.1 | ANS86222.1 | VSVS12_03092 | VSVS12_02462 | Chitinase; Belongs to the glycosyl hydrolase 18 family. Chitinase class II subfamily; KEGG: scq:SCULI_v1c08220 chitinase. | Hypothetical protein. | 0.479 |
ANS86801.1 | ANS88019.1 | VSVS12_03092 | VSVS12_04320 | Chitinase; Belongs to the glycosyl hydrolase 18 family. Chitinase class II subfamily; KEGG: scq:SCULI_v1c08220 chitinase. | Hypothetical protein. | 0.602 |
ANS88019.1 | ANS84129.1 | VSVS12_04320 | VSVS12_00312 | Hypothetical protein. | Beta-N-acetylhexosaminidase; Hydrolysis of terminal, non-reducing N-acetyl-beta-D- glucosamine residues in chitobiose and higher analogs, and in glycoproteins. Belongs to the glycosyl hydrolase 20 family; KEGG: awd:AWOD_II_1174 hexosaminidase. | 0.448 |
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