Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANS84225.1 | ANS86224.1 | VSVS12_00408 | VSVS12_02464 | Putative lipoprotein YjbF; To E. coli YmcC. | Uncharacterized protein. | 0.540 |
| ANS84225.1 | ANS86685.1 | VSVS12_00408 | VSVS12_02961 | Putative lipoprotein YjbF; To E. coli YmcC. | Periplasmic protein CpxP; Aids in combating extracytoplasmic protein-mediated toxicity; To E. coli spy. | 0.482 |
| ANS84875.1 | ANS86224.1 | VSVS12_01107 | VSVS12_02464 | Belongs to the UPF0352 family. | Uncharacterized protein. | 0.478 |
| ANS84875.1 | tyrA | VSVS12_01107 | VSVS12_00773 | Belongs to the UPF0352 family. | Contains 1 chorismate mutase domain; Contains 1 prephenate/arogenate dehydrogenase domain; KEGG: aha:AHA_1655 chorismate mutase / prephenate dehydrogenase. | 0.503 |
| ANS85577.1 | ANS86181.1 | VSVS12_01811 | VSVS12_02421 | Hypothetical protein; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.811 |
| ANS85577.1 | ANS86224.1 | VSVS12_01811 | VSVS12_02464 | Hypothetical protein; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | Uncharacterized protein. | 0.730 |
| ANS85577.1 | lexA | VSVS12_01811 | VSVS12_00004 | Hypothetical protein; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.632 |
| ANS86181.1 | ANS85577.1 | VSVS12_02421 | VSVS12_01811 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Hypothetical protein; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | 0.811 |
| ANS86181.1 | ANS86224.1 | VSVS12_02421 | VSVS12_02464 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Uncharacterized protein. | 0.520 |
| ANS86181.1 | lexA | VSVS12_02421 | VSVS12_00004 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.756 |
| ANS86223.1 | ANS86224.1 | VSVS12_02463 | VSVS12_02464 | Trans-acting transcriptional regulator of RuBisCO genes (rbcAB) expression. Contains 1 HTH lysR-type DNA-binding domain; Belongs to the LysR transcriptional regulatory family. | Uncharacterized protein. | 0.498 |
| ANS86224.1 | ANS84225.1 | VSVS12_02464 | VSVS12_00408 | Uncharacterized protein. | Putative lipoprotein YjbF; To E. coli YmcC. | 0.540 |
| ANS86224.1 | ANS84875.1 | VSVS12_02464 | VSVS12_01107 | Uncharacterized protein. | Belongs to the UPF0352 family. | 0.478 |
| ANS86224.1 | ANS85577.1 | VSVS12_02464 | VSVS12_01811 | Uncharacterized protein. | Hypothetical protein; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | 0.730 |
| ANS86224.1 | ANS86181.1 | VSVS12_02464 | VSVS12_02421 | Uncharacterized protein. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.520 |
| ANS86224.1 | ANS86223.1 | VSVS12_02464 | VSVS12_02463 | Uncharacterized protein. | Trans-acting transcriptional regulator of RuBisCO genes (rbcAB) expression. Contains 1 HTH lysR-type DNA-binding domain; Belongs to the LysR transcriptional regulatory family. | 0.498 |
| ANS86224.1 | ANS86685.1 | VSVS12_02464 | VSVS12_02961 | Uncharacterized protein. | Periplasmic protein CpxP; Aids in combating extracytoplasmic protein-mediated toxicity; To E. coli spy. | 0.547 |
| ANS86224.1 | ANS87681.1 | VSVS12_02464 | VSVS12_03981 | Uncharacterized protein. | Hypothetical protein. | 0.488 |
| ANS86224.1 | ANS87755.1 | VSVS12_02464 | VSVS12_04055 | Uncharacterized protein. | Hypothetical protein. | 0.485 |
| ANS86224.1 | lexA | VSVS12_02464 | VSVS12_00004 | Uncharacterized protein. | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.716 |
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