STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS86238.1Putative ferredoxin-like protein; Contains 2 4Fe-4S ferredoxin-type domains. (84 aa)    
Predicted Functional Partners:
ANS86334.1
Cytochrome c1.
   
 
 0.926
rip1
Quinol--cytochrome-c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.921
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.886
ANS87102.1
Hypothetical protein.
  
 
 0.880
ANS87111.1
Hypothetical protein.
  
 
 0.880
ANS85370.1
Uncharacterized protein; To yeast YER004W; KEGG: crg:105330969 oxidoreductase; With NAD(+) or NADP(+) as acceptor.
  
 0.874
ANS86335.1
Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.865
rfbB
KEGG: hma:rrnAC2178 dTDP-glucose 4,6-dehydratase.
   
 0.857
pqqL
Putative zinc protease PqqL; Belongs to the peptidase M16 family; KEGG: pmr:PMI3704 zinc protease; Metalloendopeptidases.
  
 
 0.816
pqqL-2
Putative zinc protease; Belongs to the peptidase M16 family; KEGG: vsp:VS_2565 zinc protease; Metalloendopeptidases.
  
 
 0.816
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
Server load: low (18%) [HD]