Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANS86733.1 | ANS86734.1 | VSVS12_03024 | VSVS12_03025 | Leucine-responsive regulatory protein; Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different operon; lrp mediates this effect for at least some of these operons. For example it is regulator of the branched-chain amino acid transport genes (By similarity); Contains 1 HTH asnC-type DNA-binding domain. | Hypothetical protein. | 0.563 |
| ANS86733.1 | gltB | VSVS12_03024 | VSVS12_00740 | Leucine-responsive regulatory protein; Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different operon; lrp mediates this effect for at least some of these operons. For example it is regulator of the branched-chain amino acid transport genes (By similarity); Contains 1 HTH asnC-type DNA-binding domain. | Belongs to the glutamate synthase family; Contains 1 glutamine amidotransferase type-2 domain; KEGG: vsa:VSAL_I2562 glutamate synthase (NADPH/NADH) large chain; overlaps another CDS with the same product name. | 0.478 |
| ANS86733.1 | putA | VSVS12_03024 | VSVS12_03028 | Leucine-responsive regulatory protein; Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different operon; lrp mediates this effect for at least some of these operons. For example it is regulator of the branched-chain amino acid transport genes (By similarity); Contains 1 HTH asnC-type DNA-binding domain. | Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.477 |
| ANS86734.1 | ANS86733.1 | VSVS12_03025 | VSVS12_03024 | Hypothetical protein. | Leucine-responsive regulatory protein; Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different operon; lrp mediates this effect for at least some of these operons. For example it is regulator of the branched-chain amino acid transport genes (By similarity); Contains 1 HTH asnC-type DNA-binding domain. | 0.563 |
| ANS86734.1 | putA | VSVS12_03025 | VSVS12_03028 | Hypothetical protein. | Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.443 |
| gltB | ANS86733.1 | VSVS12_00740 | VSVS12_03024 | Belongs to the glutamate synthase family; Contains 1 glutamine amidotransferase type-2 domain; KEGG: vsa:VSAL_I2562 glutamate synthase (NADPH/NADH) large chain; overlaps another CDS with the same product name. | Leucine-responsive regulatory protein; Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different operon; lrp mediates this effect for at least some of these operons. For example it is regulator of the branched-chain amino acid transport genes (By similarity); Contains 1 HTH asnC-type DNA-binding domain. | 0.478 |
| gltB | putA | VSVS12_00740 | VSVS12_03028 | Belongs to the glutamate synthase family; Contains 1 glutamine amidotransferase type-2 domain; KEGG: vsa:VSAL_I2562 glutamate synthase (NADPH/NADH) large chain; overlaps another CDS with the same product name. | Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.940 |
| putA | ANS86733.1 | VSVS12_03028 | VSVS12_03024 | Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Leucine-responsive regulatory protein; Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different operon; lrp mediates this effect for at least some of these operons. For example it is regulator of the branched-chain amino acid transport genes (By similarity); Contains 1 HTH asnC-type DNA-binding domain. | 0.477 |
| putA | ANS86734.1 | VSVS12_03028 | VSVS12_03025 | Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Hypothetical protein. | 0.443 |
| putA | gltB | VSVS12_03028 | VSVS12_00740 | Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Belongs to the glutamate synthase family; Contains 1 glutamine amidotransferase type-2 domain; KEGG: vsa:VSAL_I2562 glutamate synthase (NADPH/NADH) large chain; overlaps another CDS with the same product name. | 0.940 |