STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS86747.1Alpha-hemolysin translocation ATP-binding protein HlyB; Part of the ABC transporter complex HlyBD involved in hemolysin export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity); Belongs to the ABC transporter superfamily. Protein-1 exporter (TC 3. A. 1. 109) family; Contains 1 ABC transmembrane type-1 domain; Contains 1 ABC transporter domain; Contains 1 peptidase C39 domain. (705 aa)    
Predicted Functional Partners:
ANS86744.1
Leukotoxin secretion protein; Involved in the transport of the Leukotoxin. Belongs to the membrane fusion protein (MFP) (TC 8. A. 1) family.
 
 0.977
ANS87269.1
Involved in the secretion of proteases A, B, C and G. Belongs to the membrane fusion protein (MFP) (TC 8. A. 1) family.
 
 0.948
ANS85858.1
Mediates secretion of glycanase ExsH; Belongs to the membrane fusion protein (MFP) (TC 8. A. 1) family.
 
 0.944
ANS86745.1
Hypothetical protein.
 
  
 0.943
pstB-3
Phosphate-transporting ATPase; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.878
wspR
Diguanylate cyclase; KEGG: byi:BYI23_B000130 two-component system, chemotaxis family, response regulator WspR.
 
  
 0.869
ANS85407.1
Outer membrane efflux protein BepC; Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host; Belongs to the outer membrane factor (OMF) (TC 1. B. 17) family.
 
  
 0.858
ANS85597.1
Outer membrane efflux protein BepC; Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host; Belongs to the outer membrane factor (OMF) (TC 1. B. 17) family.
 
  
 0.858
ANS87376.1
Poly(beta-D-mannuronate) C5 epimerase; Converts beta-D-mannuronic acid (M) to alpha-L-guluronic acid (G), producing a polymer with gel-forming capacity, required for the formation of the cyst coat. Belongs to the D-mannuronate C5-epimerase family; Contains 12 hemolysin-type calcium-binding repeats; Contains 15 PbH1 repeats.
 
  
 0.814
ANS87998.1
Vibriobactin utilization protein ViuB; Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm; Belongs to the SIP oxidoreductase family; Contains 1 FAD-binding FR-type domain.
   
   0.810
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.