STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS86748.1Belongs to the UPF0319 family. (212 aa)    
Predicted Functional Partners:
ANS86086.1
Formate-dependent nitrite reductase complex subunit; Required for formate-dependent nitrite reduction. Not required for the biosynthesis of any of the c-type cytochromes nor for the secretion of the periplasmic cytochromes. Contains 2 TPR repeats.
  
     0.722
ANS84088.1
Hypothetical protein.
  
     0.643
ANS85958.1
Uncharacterized protein; To Rickettsia 17 kDa surface antigen.
  
 
   0.618
ANS84260.1
Hypothetical protein.
  
     0.600
ANS86078.1
Inner membrane protein YfeZ.
  
     0.582
rimL
Putative ribosomal-protein-alanine acetyltransferase; This enzyme acetylates the N-terminal alanine of ribosomal protein S5; Belongs to the acetyltransferase family. RimJ subfamily; Contains 1 N-acetyltransferase domain; KEGG: wce:WS08_0663 ribosomal-protein-serine acetyltransferase; Transferring groups other than amino-acyl groups.
       0.571
ANS88019.1
Hypothetical protein.
  
     0.517
ANS86286.1
Protein AhpA; When anaerobically expressed in wild-type E. coli K12 confers a hemolytic phenotype, but not in an sheA mutant. Suggests it effects the expression of the latent E. coli K12 hemolysin sheA under anaerobic conditions; Belongs to the Smp family.
  
     0.516
wspR
Diguanylate cyclase; KEGG: byi:BYI23_B000130 two-component system, chemotaxis family, response regulator WspR.
 
    0.504
ANS86747.1
Alpha-hemolysin translocation ATP-binding protein HlyB; Part of the ABC transporter complex HlyBD involved in hemolysin export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity); Belongs to the ABC transporter superfamily. Protein-1 exporter (TC 3. A. 1. 109) family; Contains 1 ABC transmembrane type-1 domain; Contains 1 ABC transporter domain; Contains 1 peptidase C39 domain.
 
     0.502
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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