STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS86775.1Inner membrane protein; Belongs to the SpmB family. (155 aa)    
Predicted Functional Partners:
ANS86776.1
Uncharacterized protein; Cell membrane; Membrane; Transmembrane; Transmembrane helix.
 
  
 0.975
ANS86774.1
KEGG: vpa:VPA1611 glutamate carboxypeptidase.
 
     0.933
ANS87631.1
Responsible for the transport of C4-dicarboxylates during anaerobic growth; Belongs to the DcuC/DcuD transporter (TC 2. A. 61) family.
  
     0.514
ANS85323.1
Required for DNA transformation jointly with TfoX2; Belongs to the TfoX family.
  
     0.500
ANS86691.1
Anaerobic C4-dicarboxylate transporter DcuA; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
  
     0.491
ANS86773.1
Hypothetical protein.
       0.483
ANS86996.1
Hypothetical protein.
  
     0.475
ANS86204.1
Hypothetical protein.
  
     0.474
ANS85853.1
Hypothetical protein.
  
     0.465
ANS85956.1
Hypothetical protein.
  
     0.452
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.