STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS86998.1Hypothetical protein. (241 aa)    
Predicted Functional Partners:
ANS86999.1
Hypothetical protein.
  
    0.787
ANS84924.1
Pectin degradation repressor protein KdgR; Transcriptional repressor of genes involved in pectinolysis and in pectinase secretion. Controls all the genes involved in pectin catabolism, including the pel genes encoding pectate lyases, KdgT which encodes the 2-keto-3-deoxygluconate transport system and KdgK which encodes the kdg kinase. Contains 1 HTH iclR-type DNA-binding domain; Contains 1 iclR-ED (iclR effector binding) domain.
  
     0.726
ANS87481.1
Is a potent inhibitor of the autophosphorylation reaction of kinase A and its reverse reaction, but does not inhibit phosphate transfer to the Spo0F response regulator once kinase A is phosphorylated. KipI is an inhibitor of the catalytic domain of kinase A affecting the ATP/ADP reactions and not the phosphotransferase functions of this domain. The inhibition is noncompetitive with respect to ATP.
  
    0.715
ANS87480.1
KipI antagonist; Counteracts the inhibitory action of KipI on sporulation. May bind to KipI, preventing its function as an inhibitor of kinase A.
  
    0.598
ANS86900.1
Hypothetical protein; Belongs to the ParB family.
  
    0.508
ANS86304.1
Putative HTH-type transcriptional regulator; Contains 1 HTH lysR-type DNA-binding domain; Belongs to the LysR transcriptional regulatory family.
  
    0.461
ANS87834.1
Protein-N(pi)-phosphohistidine--sugar phosphotransferase; KEGG: vch:VC1824 PTS system, nitrogen regulatory IIA component.
  
     0.458
ANS87181.1
Catalyzes the dehydration of D-altronate; Belongs to the UxaA family; KEGG: shl:Shal_0412 altronate dehydratase large subunit; overlaps another CDS with the same product name.
 
  
 0.445
ANS86853.1
Sialic acid TRAP transporter permease protein SiaT; Part of the tripartite ATP-independent periplasmic (TRAP) transport system SiaPT involved in the uptake of sialic acid; In the N-terminal sectio; belongs to the TRAP transporter small permease family; In the C-terminal sectio; belongs to the TRAP transporter large permease family.
 
   
 0.430
ANS84463.1
Transcriptional repressor for the pyruvate dehydrogenase complex genes aceEF and lpd; Contains 1 HTH gntR-type DNA-binding domain.
 
  
 0.417
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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