STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS87036.1Putative HTH-type transcriptional regulator YidP; Contains 1 HTH gntR-type DNA-binding domain. (141 aa)    
Predicted Functional Partners:
ANS85892.1
Putative HTH-type transcriptional regulator YurK; Contains 1 HTH gntR-type DNA-binding domain.
  
     0.675
ANS87035.1
Hypothetical protein.
  
    0.613
ANS87034.1
Putative HTH-type transcriptional regulator YwbI; Contains 1 HTH lysR-type DNA-binding domain; Belongs to the LysR transcriptional regulatory family.
  
    0.547
ANS85749.1
Repressor which binds to the hutP region in the histidine utilization (hut) operon. It blocks the expression of all the hut genes in the absence of inducer. Contains 1 HTH gntR-type DNA-binding domain.
  
     0.514
ANS87037.1
Hypothetical protein.
       0.501
ANS87097.1
Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons; Contains 1 HTH gntR-type DNA-binding domain.
  
     0.498
ANS85354.1
Transcriptional repressor of the arabinose utilization genes. Also regulates its own expression. Binds to two sequences within the promoters of the araABDLMNPQ-abfA operon and the araE gene, and to one sequence in the araR promoter. Contains 1 HTH gntR-type DNA-binding domain.
  
   
 0.450
celF
6-phospho-beta-glucosidase; Hydrolyzes cellobiose 6'-phosphate into glucose 6- phosphate (Glc6P) and glucose. Belongs to the glycosyl hydrolase 4 family; KEGG: efa:EF1411 6-phospho-beta-glucosidase.
 
     0.439
ANS87799.1
The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in sucrose transport. Contains 1 PTS EIIB type-1 domain; Contains 1 PTS EIIC type-1 domain; KEGG: gan:UMN179_01099 PTS system, sucrose-specific IIB component.
 
  
 0.408
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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