STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
speGKEGG: pat:Patl_0928 diamine N-acetyltransferase. (148 aa)    
Predicted Functional Partners:
ANS87126.1
Diamine N-acetyltransferase; Involved in the protection against polyamine toxicity by regulating their concentration. Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to the primary amino groups of spermidine to yield N(1)- and N(8)-acetylspermidine; Belongs to the acetyltransferase family; Contains 1 N-acetyltransferase domain; KEGG: van:VAA_01303 diamine N-acetyltransferase.
   
 
  0.901
ANS85595.1
Carboxynorspermidine synthase; Required for norspermidine biosynthesis and for biofilm formation; Belongs to the saccharopine dehydrogenase family. carboxynorspermidine synthase subfamily; KEGG: vch:VC1624 carboxynorspermidine synthase.
     
  0.900
speB
Agmatinase; Catalyzes the formation of putrescine from agmatine; Belongs to the arginase family. Agmatinase subfamily; KEGG: vch:VCA0814 agmatinase.
     
  0.900
ANS87795.1
Hypothetical protein.
   
   0.628
ANS87040.1
Hypothetical protein.
       0.499
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.459
ANS85380.1
KEGG: bha:BH1961 ribosomal-protein-alanine N-acetyltransferase.
  
    0.441
ANS85340.1
Hypothetical protein.
  
 
   0.412
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.