node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANS84383.1 | ANS85605.1 | VSVS12_00586 | VSVS12_01839 | Serves as a specificity factor required for RNase E- mediated decay of the small global regulatory RNAs CsrB and CsrC, it is probably not a nuclease. Nor does its activity involve c-di- GMP, despite its domain composition. Positively modulates motility gene expression, is also required for curli expression; Contains 1 EAL domain; Contains 1 GGDEF domain. | Cyclic di-GMP phosphodiesterase PdeB; Affects motility and biofilm formation, and is linked to the regulation of sulfate uptake and assimilation; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 PAS (PER-ARNT-SIM) domain. | 0.930 |
ANS84383.1 | ANS85630.1 | VSVS12_00586 | VSVS12_01864 | Serves as a specificity factor required for RNase E- mediated decay of the small global regulatory RNAs CsrB and CsrC, it is probably not a nuclease. Nor does its activity involve c-di- GMP, despite its domain composition. Positively modulates motility gene expression, is also required for curli expression; Contains 1 EAL domain; Contains 1 GGDEF domain. | Diguanylate cyclase DosC; Globin-coupled heme-based oxygen sensor protein displaying diguanylate cyclase (DGC) activity in response to oxygen availability. Thus, catalyzes the synthesis of cyclic diguanylate (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface- associated traits in bacteria (By similarity); Contains 1 GGDEF domain. | 0.799 |
ANS84383.1 | ANS85777.1 | VSVS12_00586 | VSVS12_02015 | Serves as a specificity factor required for RNase E- mediated decay of the small global regulatory RNAs CsrB and CsrC, it is probably not a nuclease. Nor does its activity involve c-di- GMP, despite its domain composition. Positively modulates motility gene expression, is also required for curli expression; Contains 1 EAL domain; Contains 1 GGDEF domain. | N,N'-diacetylchitobiose permease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system is involved in N,N'-diacetylchitobiose transport; Contains 1 PTS EIIC type-3 domain. | 0.805 |
ANS84383.1 | ANS87084.1 | VSVS12_00586 | VSVS12_03375 | Serves as a specificity factor required for RNase E- mediated decay of the small global regulatory RNAs CsrB and CsrC, it is probably not a nuclease. Nor does its activity involve c-di- GMP, despite its domain composition. Positively modulates motility gene expression, is also required for curli expression; Contains 1 EAL domain; Contains 1 GGDEF domain. | Putative signaling protein; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 MHYT domain; KEGG: vfi:VF_A0057 null; Phosphotransferases with a nitrogenous group as acceptor. | 0.829 |
ANS84383.1 | ANS87474.1 | VSVS12_00586 | VSVS12_03774 | Serves as a specificity factor required for RNase E- mediated decay of the small global regulatory RNAs CsrB and CsrC, it is probably not a nuclease. Nor does its activity involve c-di- GMP, despite its domain composition. Positively modulates motility gene expression, is also required for curli expression; Contains 1 EAL domain; Contains 1 GGDEF domain. | Putative signaling protein; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 MHYT domain; Contains 1 PAS (PER-ARNT-SIM) domain; KEGG: mbu:Mbur_0768 null; Phosphotransferases with a nitrogenous group as acceptor. | 0.617 |
ANS84383.1 | ANS87656.1 | VSVS12_00586 | VSVS12_03956 | Serves as a specificity factor required for RNase E- mediated decay of the small global regulatory RNAs CsrB and CsrC, it is probably not a nuclease. Nor does its activity involve c-di- GMP, despite its domain composition. Positively modulates motility gene expression, is also required for curli expression; Contains 1 EAL domain; Contains 1 GGDEF domain. | Cyclic-guanylate-specific phosphodiesterase; Overexpression reduces biofilm formation. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria; Contains 1 EAL domain; KEGG: spe:Spro_4742 cyclic di-GMP phosphodiesterase Gmr. | 0.878 |
ANS84383.1 | ANS87682.1 | VSVS12_00586 | VSVS12_03982 | Serves as a specificity factor required for RNase E- mediated decay of the small global regulatory RNAs CsrB and CsrC, it is probably not a nuclease. Nor does its activity involve c-di- GMP, despite its domain composition. Positively modulates motility gene expression, is also required for curli expression; Contains 1 EAL domain; Contains 1 GGDEF domain. | Cyclic-guanylate-specific phosphodiesterase; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 2 PAC (PAS-associated C-terminal) domains; Contains 2 PAS (PER-ARNT-SIM) domains; KEGG: bvi:Bcep1808_4032 cyclic di-GMP phosphodiesterase Gmr. | 0.931 |
ANS84383.1 | ANS87916.1 | VSVS12_00586 | VSVS12_04217 | Serves as a specificity factor required for RNase E- mediated decay of the small global regulatory RNAs CsrB and CsrC, it is probably not a nuclease. Nor does its activity involve c-di- GMP, despite its domain composition. Positively modulates motility gene expression, is also required for curli expression; Contains 1 EAL domain; Contains 1 GGDEF domain. | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Belongs to the phytochrome family; Contains 1 EAL domain; Contains 2 GAF domains; Contains 2 GGDEF domains. | 0.870 |
ANS84383.1 | ANS87974.1 | VSVS12_00586 | VSVS12_04275 | Serves as a specificity factor required for RNase E- mediated decay of the small global regulatory RNAs CsrB and CsrC, it is probably not a nuclease. Nor does its activity involve c-di- GMP, despite its domain composition. Positively modulates motility gene expression, is also required for curli expression; Contains 1 EAL domain; Contains 1 GGDEF domain. | Protein-glutamate O-methyltransferase; Plays an essential role in the maintenance and the formation of the three-dimensional structure of the biofilms at the later stages of their development. Absence of mbaA promotes the accumulation of larger amount of biomass on the surfaces at later stage of development, results in the overproduction of an extracellular polymeric substance that accumulates in the matrix of biofilms. This yields biofilms lacking the typical structure consisting of pillars of cells separated by fluid filled channels; Contains 1 EAL domain; Contains 1 GGDEF domain; Co [...] | 0.523 |
ANS84383.1 | vieA | VSVS12_00586 | VSVS12_01308 | Serves as a specificity factor required for RNase E- mediated decay of the small global regulatory RNAs CsrB and CsrC, it is probably not a nuclease. Nor does its activity involve c-di- GMP, despite its domain composition. Positively modulates motility gene expression, is also required for curli expression; Contains 1 EAL domain; Contains 1 GGDEF domain. | Cyclic-guanylate-specific phosphodiesterase; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Belongs to the phytochrome family; Contains 1 EAL domain; Contains 2 GAF domains; Contains 2 GGDEF domains; KEGG: vch:VC1652 c-di-GMP phosphodiesterase. | 0.887 |
ANS85605.1 | ANS84383.1 | VSVS12_01839 | VSVS12_00586 | Cyclic di-GMP phosphodiesterase PdeB; Affects motility and biofilm formation, and is linked to the regulation of sulfate uptake and assimilation; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 PAS (PER-ARNT-SIM) domain. | Serves as a specificity factor required for RNase E- mediated decay of the small global regulatory RNAs CsrB and CsrC, it is probably not a nuclease. Nor does its activity involve c-di- GMP, despite its domain composition. Positively modulates motility gene expression, is also required for curli expression; Contains 1 EAL domain; Contains 1 GGDEF domain. | 0.930 |
ANS85605.1 | ANS85630.1 | VSVS12_01839 | VSVS12_01864 | Cyclic di-GMP phosphodiesterase PdeB; Affects motility and biofilm formation, and is linked to the regulation of sulfate uptake and assimilation; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 PAS (PER-ARNT-SIM) domain. | Diguanylate cyclase DosC; Globin-coupled heme-based oxygen sensor protein displaying diguanylate cyclase (DGC) activity in response to oxygen availability. Thus, catalyzes the synthesis of cyclic diguanylate (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface- associated traits in bacteria (By similarity); Contains 1 GGDEF domain. | 0.722 |
ANS85605.1 | ANS85777.1 | VSVS12_01839 | VSVS12_02015 | Cyclic di-GMP phosphodiesterase PdeB; Affects motility and biofilm formation, and is linked to the regulation of sulfate uptake and assimilation; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 PAS (PER-ARNT-SIM) domain. | N,N'-diacetylchitobiose permease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system is involved in N,N'-diacetylchitobiose transport; Contains 1 PTS EIIC type-3 domain. | 0.472 |
ANS85605.1 | ANS87084.1 | VSVS12_01839 | VSVS12_03375 | Cyclic di-GMP phosphodiesterase PdeB; Affects motility and biofilm formation, and is linked to the regulation of sulfate uptake and assimilation; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 PAS (PER-ARNT-SIM) domain. | Putative signaling protein; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 MHYT domain; KEGG: vfi:VF_A0057 null; Phosphotransferases with a nitrogenous group as acceptor. | 0.854 |
ANS85605.1 | ANS87474.1 | VSVS12_01839 | VSVS12_03774 | Cyclic di-GMP phosphodiesterase PdeB; Affects motility and biofilm formation, and is linked to the regulation of sulfate uptake and assimilation; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 PAS (PER-ARNT-SIM) domain. | Putative signaling protein; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 MHYT domain; Contains 1 PAS (PER-ARNT-SIM) domain; KEGG: mbu:Mbur_0768 null; Phosphotransferases with a nitrogenous group as acceptor. | 0.738 |
ANS85605.1 | ANS87656.1 | VSVS12_01839 | VSVS12_03956 | Cyclic di-GMP phosphodiesterase PdeB; Affects motility and biofilm formation, and is linked to the regulation of sulfate uptake and assimilation; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 PAS (PER-ARNT-SIM) domain. | Cyclic-guanylate-specific phosphodiesterase; Overexpression reduces biofilm formation. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria; Contains 1 EAL domain; KEGG: spe:Spro_4742 cyclic di-GMP phosphodiesterase Gmr. | 0.740 |
ANS85605.1 | ANS87682.1 | VSVS12_01839 | VSVS12_03982 | Cyclic di-GMP phosphodiesterase PdeB; Affects motility and biofilm formation, and is linked to the regulation of sulfate uptake and assimilation; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 PAS (PER-ARNT-SIM) domain. | Cyclic-guanylate-specific phosphodiesterase; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 2 PAC (PAS-associated C-terminal) domains; Contains 2 PAS (PER-ARNT-SIM) domains; KEGG: bvi:Bcep1808_4032 cyclic di-GMP phosphodiesterase Gmr. | 0.884 |
ANS85605.1 | ANS87916.1 | VSVS12_01839 | VSVS12_04217 | Cyclic di-GMP phosphodiesterase PdeB; Affects motility and biofilm formation, and is linked to the regulation of sulfate uptake and assimilation; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 PAS (PER-ARNT-SIM) domain. | Phytochrome-like protein cph2; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Belongs to the phytochrome family; Contains 1 EAL domain; Contains 2 GAF domains; Contains 2 GGDEF domains. | 0.736 |
ANS85605.1 | vieA | VSVS12_01839 | VSVS12_01308 | Cyclic di-GMP phosphodiesterase PdeB; Affects motility and biofilm formation, and is linked to the regulation of sulfate uptake and assimilation; Contains 1 EAL domain; Contains 1 GGDEF domain; Contains 1 PAS (PER-ARNT-SIM) domain. | Cyclic-guanylate-specific phosphodiesterase; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Belongs to the phytochrome family; Contains 1 EAL domain; Contains 2 GAF domains; Contains 2 GGDEF domains; KEGG: vch:VC1652 c-di-GMP phosphodiesterase. | 0.722 |
ANS85630.1 | ANS84383.1 | VSVS12_01864 | VSVS12_00586 | Diguanylate cyclase DosC; Globin-coupled heme-based oxygen sensor protein displaying diguanylate cyclase (DGC) activity in response to oxygen availability. Thus, catalyzes the synthesis of cyclic diguanylate (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface- associated traits in bacteria (By similarity); Contains 1 GGDEF domain. | Serves as a specificity factor required for RNase E- mediated decay of the small global regulatory RNAs CsrB and CsrC, it is probably not a nuclease. Nor does its activity involve c-di- GMP, despite its domain composition. Positively modulates motility gene expression, is also required for curli expression; Contains 1 EAL domain; Contains 1 GGDEF domain. | 0.799 |