STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS87131.1Hypothetical protein. (615 aa)    
Predicted Functional Partners:
aarS
Alanine--tRNA ligase; KEGG: vsp:VS_0624 alanyl-tRNA synthetase.
  
     0.656
ANS87877.1
Hypothetical protein.
  
     0.655
ANS86097.1
Hypothetical protein.
  
     0.599
ANS87303.1
Proton-dependent permease that transports di- and tripeptides; Belongs to the PTR2/POT transporter (TC 2. A. 17) family. DtpB subfamily.
 
   
 0.558
ANS83873.1
Hypothetical protein.
  
     0.547
ANS84378.1
Hypothetical protein.
  
     0.507
ANS86790.1
Lysophospholipase; KEGG: dsy:DSY0424 lysophospholipase.
  
   
 0.507
ANS86274.1
Hypothetical protein.
  
     0.503
alaE
L-alanine exporter AlaE; Exports L-alanine; Belongs to the AlaE exporter family.
  
     0.502
ANS84061.1
Hypothetical protein.
  
     0.489
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.