STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS87181.1Catalyzes the dehydration of D-altronate; Belongs to the UxaA family; KEGG: shl:Shal_0412 altronate dehydratase large subunit; overlaps another CDS with the same product name. (391 aa)    
Predicted Functional Partners:
ANS87180.1
KEGG: spl:Spea_3856 altronate dehydratase small subunit; overlaps another CDS with the same product name.
 
  
  0.993
kduD
2-deoxy-D-gluconate 3-dehydrogenase; Catalyzes the reduction of 2,5-diketo-3-deoxygluconate (DKII or 4,6-dihydroxy-2,5-dioxohexanoate) into 2-keto-3- deoxygluconate (KDG or 2-dehydro-3-deoxygluconate) with a concomitant oxidation of NADH; Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: ype:YPO1724 2-deoxy-D-gluconate 3-dehydrogenase.
 
  
 0.954
kdgK
2-dehydro-3-deoxygluconokinase; Catalyzes the phosphorylation of 2-keto-3-deoxygluconate (KDG) to produce 2-keto-3-deoxy-6-phosphogluconate (KDPG); Belongs to the carbohydrate kinase PfkB family; KEGG: vvy:VV0554 2-dehydro-3-deoxygluconokinase.
 
  
 0.876
gntZ
Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
  
  0.825
lra3
L-rhamnonate dehydratase; Catalyzes the ring opening of D-galactaro-1,4-lactone to yield 5-keto-4-deoxy-D-glucarate (KDG) via a beta-elimination reaction. This is a step in the oxidative degradation pathway of D-galacturonate, which allows A. tumefaciens to utilize D- galacturonate as a sole carbon source. To a lesser extent, can also use D-glucaro-1,4-lactone as substrate to produce KDG, but cannot use D-galactaro-1,5-lactone, D-glucaro-6,3-lactone and linear D-glucarate; Belongs to the mandelate racemase/muconate lactonizing enzyme family; KEGG: ant:Arnit_0012 L-rhamnonate dehydratase.
 
  
 0.816
ANS84262.1
Ribulose-phosphate 3-epimerase; Catalyzes the reversible epimerization of D-ribulose 5- phosphate to D-xylulose 5-phosphate; Belongs to the ribulose-phosphate 3-epimerase family; KEGG: eco:b3386 ribulose-phosphate 3-epimerase.
     
  0.800
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
  0.800
ANS86868.1
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate; Belongs to the ribose 5-phosphate isomerase family; KEGG: vsp:VS_0167 ribose 5-phosphate isomerase A.
     
  0.800
ANS86873.1
KEGG: nis:NIS_0320 ribulose-phosphate 3-epimerase.
     
  0.800
ANS86853.1
Sialic acid TRAP transporter permease protein SiaT; Part of the tripartite ATP-independent periplasmic (TRAP) transport system SiaPT involved in the uptake of sialic acid; In the N-terminal sectio; belongs to the TRAP transporter small permease family; In the C-terminal sectio; belongs to the TRAP transporter large permease family.
 
    0.595
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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