Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANS87180.1 | ANS87181.1 | VSVS12_03471 | VSVS12_03472 | KEGG: spl:Spea_3856 altronate dehydratase small subunit; overlaps another CDS with the same product name. | Catalyzes the dehydration of D-altronate; Belongs to the UxaA family; KEGG: shl:Shal_0412 altronate dehydratase large subunit; overlaps another CDS with the same product name. | 0.993 |
| ANS87180.1 | ANS87182.1 | VSVS12_03471 | VSVS12_03473 | KEGG: spl:Spea_3856 altronate dehydratase small subunit; overlaps another CDS with the same product name. | Hypothetical protein. | 0.516 |
| ANS87180.1 | lra3 | VSVS12_03471 | VSVS12_03474 | KEGG: spl:Spea_3856 altronate dehydratase small subunit; overlaps another CDS with the same product name. | L-rhamnonate dehydratase; Catalyzes the ring opening of D-galactaro-1,4-lactone to yield 5-keto-4-deoxy-D-glucarate (KDG) via a beta-elimination reaction. This is a step in the oxidative degradation pathway of D-galacturonate, which allows A. tumefaciens to utilize D- galacturonate as a sole carbon source. To a lesser extent, can also use D-glucaro-1,4-lactone as substrate to produce KDG, but cannot use D-galactaro-1,5-lactone, D-glucaro-6,3-lactone and linear D-glucarate; Belongs to the mandelate racemase/muconate lactonizing enzyme family; KEGG: ant:Arnit_0012 L-rhamnonate dehydratase. | 0.617 |
| ANS87181.1 | ANS87180.1 | VSVS12_03472 | VSVS12_03471 | Catalyzes the dehydration of D-altronate; Belongs to the UxaA family; KEGG: shl:Shal_0412 altronate dehydratase large subunit; overlaps another CDS with the same product name. | KEGG: spl:Spea_3856 altronate dehydratase small subunit; overlaps another CDS with the same product name. | 0.993 |
| ANS87181.1 | ANS87182.1 | VSVS12_03472 | VSVS12_03473 | Catalyzes the dehydration of D-altronate; Belongs to the UxaA family; KEGG: shl:Shal_0412 altronate dehydratase large subunit; overlaps another CDS with the same product name. | Hypothetical protein. | 0.513 |
| ANS87181.1 | lra3 | VSVS12_03472 | VSVS12_03474 | Catalyzes the dehydration of D-altronate; Belongs to the UxaA family; KEGG: shl:Shal_0412 altronate dehydratase large subunit; overlaps another CDS with the same product name. | L-rhamnonate dehydratase; Catalyzes the ring opening of D-galactaro-1,4-lactone to yield 5-keto-4-deoxy-D-glucarate (KDG) via a beta-elimination reaction. This is a step in the oxidative degradation pathway of D-galacturonate, which allows A. tumefaciens to utilize D- galacturonate as a sole carbon source. To a lesser extent, can also use D-glucaro-1,4-lactone as substrate to produce KDG, but cannot use D-galactaro-1,5-lactone, D-glucaro-6,3-lactone and linear D-glucarate; Belongs to the mandelate racemase/muconate lactonizing enzyme family; KEGG: ant:Arnit_0012 L-rhamnonate dehydratase. | 0.816 |
| ANS87182.1 | ANS87180.1 | VSVS12_03473 | VSVS12_03471 | Hypothetical protein. | KEGG: spl:Spea_3856 altronate dehydratase small subunit; overlaps another CDS with the same product name. | 0.516 |
| ANS87182.1 | ANS87181.1 | VSVS12_03473 | VSVS12_03472 | Hypothetical protein. | Catalyzes the dehydration of D-altronate; Belongs to the UxaA family; KEGG: shl:Shal_0412 altronate dehydratase large subunit; overlaps another CDS with the same product name. | 0.513 |
| ANS87182.1 | ANS87238.1 | VSVS12_03473 | VSVS12_03529 | Hypothetical protein. | Putative transporter YyaM; Belongs to the EamA transporter family; Contains 2 EamA domains. | 0.432 |
| ANS87182.1 | lra3 | VSVS12_03473 | VSVS12_03474 | Hypothetical protein. | L-rhamnonate dehydratase; Catalyzes the ring opening of D-galactaro-1,4-lactone to yield 5-keto-4-deoxy-D-glucarate (KDG) via a beta-elimination reaction. This is a step in the oxidative degradation pathway of D-galacturonate, which allows A. tumefaciens to utilize D- galacturonate as a sole carbon source. To a lesser extent, can also use D-glucaro-1,4-lactone as substrate to produce KDG, but cannot use D-galactaro-1,5-lactone, D-glucaro-6,3-lactone and linear D-glucarate; Belongs to the mandelate racemase/muconate lactonizing enzyme family; KEGG: ant:Arnit_0012 L-rhamnonate dehydratase. | 0.512 |
| ANS87238.1 | ANS87182.1 | VSVS12_03529 | VSVS12_03473 | Putative transporter YyaM; Belongs to the EamA transporter family; Contains 2 EamA domains. | Hypothetical protein. | 0.432 |
| lra3 | ANS87180.1 | VSVS12_03474 | VSVS12_03471 | L-rhamnonate dehydratase; Catalyzes the ring opening of D-galactaro-1,4-lactone to yield 5-keto-4-deoxy-D-glucarate (KDG) via a beta-elimination reaction. This is a step in the oxidative degradation pathway of D-galacturonate, which allows A. tumefaciens to utilize D- galacturonate as a sole carbon source. To a lesser extent, can also use D-glucaro-1,4-lactone as substrate to produce KDG, but cannot use D-galactaro-1,5-lactone, D-glucaro-6,3-lactone and linear D-glucarate; Belongs to the mandelate racemase/muconate lactonizing enzyme family; KEGG: ant:Arnit_0012 L-rhamnonate dehydratase. | KEGG: spl:Spea_3856 altronate dehydratase small subunit; overlaps another CDS with the same product name. | 0.617 |
| lra3 | ANS87181.1 | VSVS12_03474 | VSVS12_03472 | L-rhamnonate dehydratase; Catalyzes the ring opening of D-galactaro-1,4-lactone to yield 5-keto-4-deoxy-D-glucarate (KDG) via a beta-elimination reaction. This is a step in the oxidative degradation pathway of D-galacturonate, which allows A. tumefaciens to utilize D- galacturonate as a sole carbon source. To a lesser extent, can also use D-glucaro-1,4-lactone as substrate to produce KDG, but cannot use D-galactaro-1,5-lactone, D-glucaro-6,3-lactone and linear D-glucarate; Belongs to the mandelate racemase/muconate lactonizing enzyme family; KEGG: ant:Arnit_0012 L-rhamnonate dehydratase. | Catalyzes the dehydration of D-altronate; Belongs to the UxaA family; KEGG: shl:Shal_0412 altronate dehydratase large subunit; overlaps another CDS with the same product name. | 0.816 |
| lra3 | ANS87182.1 | VSVS12_03474 | VSVS12_03473 | L-rhamnonate dehydratase; Catalyzes the ring opening of D-galactaro-1,4-lactone to yield 5-keto-4-deoxy-D-glucarate (KDG) via a beta-elimination reaction. This is a step in the oxidative degradation pathway of D-galacturonate, which allows A. tumefaciens to utilize D- galacturonate as a sole carbon source. To a lesser extent, can also use D-glucaro-1,4-lactone as substrate to produce KDG, but cannot use D-galactaro-1,5-lactone, D-glucaro-6,3-lactone and linear D-glucarate; Belongs to the mandelate racemase/muconate lactonizing enzyme family; KEGG: ant:Arnit_0012 L-rhamnonate dehydratase. | Hypothetical protein. | 0.512 |