STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS87206.1Hypothetical protein. (478 aa)    
Predicted Functional Partners:
ANS84587.1
Hypothetical protein.
 
     0.732
ANS87450.1
Hypothetical protein.
 
     0.727
ANS86995.1
Hypothetical protein.
 
     0.724
ANS85267.1
dTDP-3-amino-3,4, 6-trideoxy-alpha-D-glucopyranose; S-adenosyl-L-methionine-dependent methyltransferase involved in the biosynthesis of desosamine, found in certain macrolide antibiotics such as erthyromycin, azithromycin, and clarithromycin. Catalyzes the last step in the biosynthesis of dTDP-desosamine; Belongs to the methyltransferase TylM1/DesVI family.
  
     0.712
ANS87207.1
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily; KEGG: vsp:VS_II0324 malate synthase.
 
     0.692
ANS85255.1
Hypothetical protein.
  
     0.684
ANS84222.1
Hypothetical protein.
  
     0.667
ANS86994.1
Uncharacterized protein; Plasmid; Transposable element.
 
     0.642
ANS84586.1
Uncharacterized protein; Plasmid; Transposable element.
 
     0.629
ANS87449.1
Uncharacterized protein; Plasmid; Transposable element.
 
     0.629
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.