STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exoKBeta-glucanase; Belongs to the glycosyl hydrolase 16 family; Contains 1 dockerin domain; Contains 1 GH16 (glycosyl hydrolase family 16) domain; KEGG: mor:MOC_5281 endo-1,3-1,4-beta-glycanase ExoK; Glycosidases, i. e. enzymes hydrolyzing O- and S-glycosyl compounds. (264 aa)    
Predicted Functional Partners:
ANS87283.1
Hypothetical protein.
 
     0.639
ANS87280.1
Hypothetical protein.
       0.563
ANS87281.1
Hypothetical protein.
       0.562
ANS87279.1
Hypothetical protein.
       0.550
bcsA
Cellulose synthase (UDP-forming); In the N-terminal sectio; belongs to the glycosyltransferase 2 family; In the C-terminal sectio; belongs to the AcsB/BcsB family; Contains 1 PilZ domain; KEGG: pgb:H744_2c1635 cellulose synthase (UDP-forming).
       0.513
ANS87278.1
Hypothetical protein.
       0.513
rsbW
KEGG: vsa:VSAL_II0326 serine/threonine-protein kinase RsbW.
       0.408
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.