STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcbDBelongs to the pterin-4-alpha-carbinolamine dehydratase family; KEGG: vch:VCA0827 4a-hydroxytetrahydrobiopterin dehydratase. (120 aa)    
Predicted Functional Partners:
phhA
Phenylalanine 4-monooxygenase; Belongs to the biopterin-dependent aromatic amino acid hydroxylase family; KEGG: vha:VIBHAR_05421 phenylalanine-4-hydroxylase.
 
 0.997
hppD
4-hydroxyphenylpyruvate dioxygenase; Belongs to the 4HPPD family; KEGG: ppr:PBPRB1180 4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.670
hmgA
Belongs to the homogentisate dioxygenase family; KEGG: vch:VC1345 homogentisate 1,2-dioxygenase.
  
  
 0.618
aspC
Aspartate transaminase; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family; KEGG: ype:YPO1410 aspartate aminotransferase.
  
  
 0.487
ANS87532.1
Aspartate transaminase; Catalyzes the irreversible transamination of the L- tryptophan metabolite L-kynurenine to form kynurenic acid (KA). Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. Facilitates cellular uptake of long-chain free fatty acids (By similarity); Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family; KEGG: vfu:vfu_B00279 aspartate aminotransferase.
  
  
 0.487
ANS87292.1
Hypothetical protein.
       0.474
aacS
Acetoacetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family; KEGG: vpa:VPA1158 acetoacetyl-CoA synthetase.
       0.420
ANS84263.1
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
  
  
 0.417
ANS87962.1
Hypothetical protein.
  
  
 0.400
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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