STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS87502.1Efflux pump periplasmic linker BepF; May contribute to resistance to some drugs, such as deoxycholate, sodium dodecyl sulfate and nalidixic acid, in the absence of BepD and BepE; Belongs to the membrane fusion protein (MFP) (TC 8. A. 1) family. (373 aa)    
Predicted Functional Partners:
ANS86835.1
The inner membrane transporter component of an antibiotic efflux pump. Confers resistance to numerous structurally unrelated antibiotics such as carbenicillin, chloramphenicol, erythromycin, novobiocin, streptomycin and tetracycline. Is not involved in organic solvent efflux. Belongs to the resistance-nodulation-cell division (RND) (TC 2. A. 6) family.
 0.987
ANS83947.1
Putative transporter; Could be a drug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2. A. 6) family.
 0.982
ANS87503.1
The inner membrane transporter component of an antibiotic efflux pump. Confers resistance to numerous structurally unrelated antibiotics such as carbenicillin, chloramphenicol, erythromycin, novobiocin, streptomycin and tetracycline. Is not involved in organic solvent efflux. Belongs to the resistance-nodulation-cell division (RND) (TC 2. A. 6) family.
 
 0.969
ANS86350.1
Outer membrane channel, which is required for the function of several efflux systems such as AcrAB-TolC, AcrEF-TolC, EmrAB-TolC and MacAB-TolC. These systems are involved in export of antibiotics and other toxic compounds from the cell. TolC is also involved in import of colicin E1 into the cells; Belongs to the outer membrane factor (OMF) (TC 1. B. 17) family.
 
 0.954
ANS86225.1
Putative transporter; Could be a drug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2. A. 6) family.
 
 0.829
ANS86890.1
P-hydroxybenzoic acid efflux pump subunit AaeA; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8. A. 1) family.
 
     0.735
ANS87879.1
P-hydroxybenzoic acid efflux pump subunit AaeA; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8. A. 1) family.
 
     0.710
ANS85094.1
Swarming motility protein SwrC; Required for self-resistance to surfactin, an antimicrobial lipopeptide surfactant produced by B. subtilis. Also required for swarming motility; Belongs to the resistance-nodulation-cell division (RND) (TC 2. A. 6) family.
 
 
 0.686
ANS85250.1
Multidrug resistance protein MdtB; The MdtABC tripartite complex confers resistance against novobiocin and deoxycholate; Belongs to the resistance-nodulation-cell division (RND) (TC 2. A. 6) family. MdtB subfamily.
 
 
 0.680
ANS85805.1
Nodulation protein NolG; Involved in the production of Medicago-specific nodulation signal molecule. Belongs to the resistance-nodulation-cell division (RND) (TC 2. A. 6) family.
 
 
 0.675
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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