STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS87798.1Repressor for the scr operon. Binds D-fructose as an inducer. Contains 1 HTH lacI-type DNA-binding domain. (328 aa)    
Predicted Functional Partners:
gltB
Belongs to the glutamate synthase family; Contains 1 glutamine amidotransferase type-2 domain; KEGG: vsa:VSAL_I2562 glutamate synthase (NADPH/NADH) large chain; overlaps another CDS with the same product name.
    
 
 0.784
scrK
Fructokinase; Belongs to the carbohydrate kinase PfkB family; KEGG: vag:N646_3834 fructokinase.
 
  
 0.642
ANS87799.1
The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in sucrose transport. Contains 1 PTS EIIB type-1 domain; Contains 1 PTS EIIC type-1 domain; KEGG: gan:UMN179_01099 PTS system, sucrose-specific IIB component.
 
   
 0.593
mtlA
The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in mannitol transport (By similarity); Contains 1 PTS EIIA type-2 domain; KEGG: yfr:AW19_3321 PTS system, mannitol-specific IIA component.
   
 
 0.491
sacA
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source. Belongs to the glycosyl hydrolase 32 family; KEGG: vag:N646_3835 beta-fructofuranosidase.
 
  
 0.467
ANS84719.1
HPr-like protein Crh; Involved in carbon catabolite repression (CCR); Belongs to the HPr family; Contains 1 HPr domain.
 
 
 
 0.435
ANS87834.1
Protein-N(pi)-phosphohistidine--sugar phosphotransferase; KEGG: vch:VC1824 PTS system, nitrogen regulatory IIA component.
   
 
 0.413
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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