STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
melAAlpha-galactosidase; Belongs to the glycosyl hydrolase 4 family; KEGG: esc:Entcl_3271 alpha-galactosidase. (450 aa)    
Predicted Functional Partners:
malZ
Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family; KEGG: kvd:KR75_26480 alpha-glucosidase.
  
  
 0.917
galA
Alpha-galactosidase; KEGG: vha:VIBHAR_01858 alpha-galactosidase.
    
 0.905
sacA
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source. Belongs to the glycosyl hydrolase 32 family; KEGG: vag:N646_3835 beta-fructofuranosidase.
     
 0.902
ANS87811.1
Melibiose operon regulatory protein; Transcription activator for the expression of the melAB operon. MelR binds at two sites located upstream of the melAB transcription site (By similarity); Contains 1 HTH araC/xylS-type DNA-binding domain.
 
     0.806
ANS87809.1
Melibiose carrier protein; Responsible for melibiose and other galactoside transport. It is capable of using hydrogen, sodium, and lithium cations as coupling cations for cotransport, depending on the particular sugar transported (symport system). Belongs to the sodium:galactoside symporter (TC 2. A. 2) family.
 
  
 0.645
ANS87820.1
Periplasmic alpha-galactoside-binding protein; Probably involved in an alpha-galactosides intake transport system. Belongs to the bacterial solute-binding protein 5 family.
  
     0.622
manB-2
Beta-mannosidase; Exoglycosidase that cleaves the single beta-linked mannose residue from the non-reducing end of beta-mannosidic oligosaccharides of various complexity and length. Prefers manobiose over mannotriose and has no activity against polymeric mannan. Is also severly restricetd by galactosyl substitutions at the +1 subsite (By similarity); Belongs to the glycosyl hydrolase 2 family. Beta- mannosidase B subfamily; KEGG: vvu:VV2_1361 beta-mannosidase.
 
   
 0.491
bglA
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family; KEGG: lmo:lmo0319 6-phospho-beta-glucosidase.
 
  
 0.441
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.