STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH70846.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)    
Predicted Functional Partners:
KIH70845.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.988
KIH71371.1
Two-component sensor histidine kinase YkoG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.933
KIH71819.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.919
KIH71933.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.895
KIH71991.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.891
KIH71701.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.891
KIH70616.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.839
KIH69739.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.792
ribA
GTP cyclohydrolase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
     
 0.771
KIH70693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.711
Your Current Organism:
Salinicoccus roseus
NCBI taxonomy Id: 45670
Other names: ATCC 49258, CCM 3516, CCUG 43291, CIP 104761, DSM 5351, JCM 14630, Micrococcus sp. CCM 168, S. roseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.