STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_14010Uncharacterized protein. (252 aa)    
Predicted Functional Partners:
ALC62_00887
Latrophilin Cirl; Belongs to the G-protein coupled receptor 2 family.
    
  0.668
ALC62_15103
Protein eyes shut.
    
 0.630
ALC62_11370
Histone-lysine N-methyltransferase PRDM9.
    
  0.622
ALC62_12855
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.612
ALC62_01778
Spectrin alpha chain.
    
  0.529
ALC62_10330
Muscle M-line assembly protein unc-89.
    
 0.524
ALC62_11556
Myosin light chain kinase, smooth muscle.
    
 0.524
ALC62_14543
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.512
ALC62_15457
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
    
  0.511
ALC62_02215
Titin.
    
 0.470
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.