STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_13326G patch domain-containing protein 1 like protein. (944 aa)    
Predicted Functional Partners:
ALC62_00128
Pre-mRNA-splicing factor Syf2.
    
  0.948
ALC62_06227
WD repeat domain-containing protein 83.
    
 
 0.939
ALC62_09592
Coiled-coil domain-containing protein 12.
    
 0.924
ALC62_09329
Pleiotropic regulator 1.
    
 
 0.919
ALC62_14058
Pre-mRNA-processing factor 19.
    
 
 0.885
ALC62_02754
Coiled-coil domain-containing protein 94.
    
  0.870
ALC62_04595
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.851
ALC62_05826
SH2 domain-containing adapter protein F.
    
  0.839
ALC62_03428
Serine/arginine repetitive matrix protein 1.
     
 0.839
ALC62_09131
Pre-mRNA-processing factor 17.
    
  0.821
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.