STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_11011Periodic tryptophan protein 2 like protein. (922 aa)    
Predicted Functional Partners:
ALC62_13286
WD repeat-containing protein 3.
   
0.999
ALC62_03521
HEAT repeat-containing protein 1.
   
 0.999
ALC62_03481
WD repeat-containing protein 36.
   
0.999
ALC62_03185
Bystin.
   
 
 0.999
ALC62_15800
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.999
ALC62_14128
WD repeat-containing protein 46.
   
 
 0.999
ALC62_14378
U3 small nucleolar RNA-associated protein 18 like protein.
   
 0.999
ALC62_13204
Nucleolar protein 14.
   
 
 0.999
ALC62_11845
Nucleolar protein 6.
   
 0.999
ALC62_11755
U3 small nucleolar RNA-interacting protein 2.
   
 
0.999
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.