STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_10381Helix-loop-helix protein 13. (229 aa)    
Predicted Functional Partners:
ALC62_10619
Protein daughterless.
    
 0.830
ALC62_10624
Protein daughterless.
    
 0.830
ALC62_01216
LIM domain-binding protein 2.
    
 0.746
ALC62_01213
Uncharacterized protein.
    
 0.746
ALC62_10926
GATA-binding factor A.
   
 0.633
ALC62_10927
Transcription factor GATA-4.
   
 0.633
ALC62_10351
GATA-binding factor A.
   
 0.633
ALC62_14529
Erythroid transcription factor.
   
 0.633
ALC62_14530
GATA-binding factor 3.
   
 0.633
ALC62_15226
Protein big brother.
     
 0.601
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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