STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_04470Uncharacterized protein. (115 aa)    
Predicted Functional Partners:
ALC62_14128
WD repeat-containing protein 46.
   
   0.800
ALC62_10428
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 
 0.769
ALC62_03185
Bystin.
   
   0.769
ALC62_15290
Nucleolar MIF4G domain-containing protein 1.
   
   0.737
ALC62_01518
Protein MAK16 like protein A.
   
   0.734
ALC62_12281
rRNA 2'-O-methyltransferase fibrillarin.
   
   0.733
ALC62_05494
Eukaryotic initiation factor 4A-III.
   
   0.731
ALC62_14424
Ribosomal_L7Ae domain-containing protein.
   
   0.636
ALC62_14425
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.636
ALC62_07600
Ribosomal_L7Ae domain-containing protein.
   
   0.636
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.