STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_03147Coiled-coil domain-containing protein 13. (552 aa)    
Predicted Functional Partners:
ALC62_12107
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.993
ALC62_02201
Acyl-CoA synthetase family member 4.
  
  
 0.890
ALC62_13565
Mycosubtilin synthase subunit C.
  
  
 0.881
ALC62_13564
Tyrocidine synthase 3.
  
  
 0.881
ALC62_09598
Tiggy-winkle hedgehog protein.
   
 0.753
ALC62_09601
Sonic hedgehog protein.
   
 0.753
ALC62_10305
Chitin synthase 8.
  
 
 0.558
ALC62_04381
Chitin synthase 3.
  
 
 0.558
ALC62_01582
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.530
ALC62_05255
Neuronal PAS domain-containing protein 4.
   
    0.510
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.