STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_03104Uncharacterized protein. (361 aa)    
Predicted Functional Partners:
ALC62_06662
Protein lin-52 like protein.
    
 0.564
ALC62_03659
Protein lin-54 like protein.
    
 0.560
ALC62_08860
Putative histone-binding protein Caf1.
    
 0.554
ALC62_08699
Uncharacterized protein.
  
     0.529
ALC62_04436
DNA_pol_B_2 domain-containing protein.
  
     0.529
ALC62_01136
Uncharacterized protein.
  
     0.526
ALC62_11828
Protein lin-9 like protein.
    
 0.523
ALC62_12818
Uncharacterized protein.
  
     0.520
ALC62_12267
Uncharacterized protein.
  
     0.518
ALC62_15397
DNA_pol_B_2 domain-containing protein.
  
     0.515
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.