STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_03061DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1338 aa)    
Predicted Functional Partners:
ALC62_13617
DNA (Cytosine-5)-methyltransferase 3B; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 0.988
ALC62_12562
E3 ubiquitin-protein ligase UHRF1.
  
 0.984
ALC62_04037
Ubiquitin carboxyl-terminal hydrolase 7.
   
 
 0.966
ALC62_10626
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
   
 0.954
ALC62_04635
Histone-lysine N-methyltransferase E(Z).
   
 0.946
ALC62_02022
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.945
ALC62_08261
Gamma-tubulin complex component.
    
 0.943
ALC62_01032
Ubiquitin-40S ribosomal protein S27a.
    
 
 0.914
ALC62_02613
Ubiquitin-60S ribosomal protein L40.
    
 
 0.909
ALC62_15605
Polyubiquitin-A.
    
 
 0.878
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.