Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALC62_01368 | ALC62_01759 | A0A151IP95 | A0A195D3T8 | Protein yellow. | AP-3 complex subunit delta-1. | 0.471 |
ALC62_01368 | ALC62_04476 | A0A151IP95 | A0A151IK44 | Protein yellow. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.467 |
ALC62_01368 | ALC62_05169 | A0A151IP95 | A0A151IK21 | Protein yellow. | AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. | 0.549 |
ALC62_01368 | ALC62_05311 | A0A151IP95 | A0A195CUI0 | Protein yellow. | Cation-independent mannose-6-phosphate receptor. | 0.505 |
ALC62_01368 | ALC62_07569 | A0A151IP95 | A0A195CMA1 | Protein yellow. | Sphingosine kinase 2. | 0.437 |
ALC62_01368 | ALC62_09311 | A0A151IP95 | A0A195CHZ0 | Protein yellow. | Uncharacterized protein. | 0.453 |
ALC62_01368 | ALC62_10003 | A0A151IP95 | A0A151IEN6 | Protein yellow. | Putative oxidoreductase yrbE. | 0.434 |
ALC62_01368 | ALC62_10563 | A0A151IP95 | A0A195CD00 | Protein yellow. | Transmembrane emp24 domain-containing protein 7. | 0.444 |
ALC62_01368 | ALC62_11838 | A0A151IP95 | A0A195C9K4 | Protein yellow. | AP complex subunit beta. | 0.558 |
ALC62_01368 | ALC62_15453 | A0A151IP95 | A0A151I7J9 | Protein yellow. | AP-1 complex subunit gamma. | 0.473 |
ALC62_01759 | ALC62_01368 | A0A195D3T8 | A0A151IP95 | AP-3 complex subunit delta-1. | Protein yellow. | 0.471 |
ALC62_01759 | ALC62_05169 | A0A195D3T8 | A0A151IK21 | AP-3 complex subunit delta-1. | AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. | 0.636 |
ALC62_01759 | ALC62_05311 | A0A195D3T8 | A0A195CUI0 | AP-3 complex subunit delta-1. | Cation-independent mannose-6-phosphate receptor. | 0.701 |
ALC62_01759 | ALC62_07569 | A0A195D3T8 | A0A195CMA1 | AP-3 complex subunit delta-1. | Sphingosine kinase 2. | 0.591 |
ALC62_01759 | ALC62_11838 | A0A195D3T8 | A0A195C9K4 | AP-3 complex subunit delta-1. | AP complex subunit beta. | 0.984 |
ALC62_01759 | ALC62_15453 | A0A195D3T8 | A0A151I7J9 | AP-3 complex subunit delta-1. | AP-1 complex subunit gamma. | 0.601 |
ALC62_04476 | ALC62_01368 | A0A151IK44 | A0A151IP95 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | Protein yellow. | 0.467 |
ALC62_04476 | ALC62_09311 | A0A151IK44 | A0A195CHZ0 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | Uncharacterized protein. | 0.978 |
ALC62_05169 | ALC62_01368 | A0A151IK21 | A0A151IP95 | AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. | Protein yellow. | 0.549 |
ALC62_05169 | ALC62_01759 | A0A151IK21 | A0A195D3T8 | AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. | AP-3 complex subunit delta-1. | 0.636 |
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