STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_11759POC1 centriolar protein like protein B. (361 aa)    
Predicted Functional Partners:
ALC62_05657
Retinoblastoma-binding protein 5.
   
0.967
ALC62_08562
Histone-lysine N-methyltransferase SETD1B.
   
 0.965
ALC62_07658
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.932
ALC62_02613
Ubiquitin-60S ribosomal protein L40.
    
 0.922
ALC62_07512
Uncharacterized protein.
    
 
 0.906
ALC62_01032
Ubiquitin-40S ribosomal protein S27a.
   
  0.889
ALC62_15458
Host cell factor.
    
 0.881
ALC62_10990
Protein unc-79 like protein.
    
 0.880
ALC62_12566
Uncharacterized protein C12orf41 like protein.
    
 0.879
ALC62_14330
PEHE domain-containing protein.
    
 0.873
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.