STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_12026Transcription factor Ken. (482 aa)    
Predicted Functional Partners:
ALC62_09425
RNA-binding protein 34.
    
 
 0.790
ALC62_12855
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.696
ALC62_01067
Lysosomal-trafficking regulator.
      
 0.649
ALC62_04179
Zinc finger CCHC-type and RNA-binding motif-containing protein 1.
    
 
 0.647
ALC62_03274
PHD finger protein 20-like protein 1.
  
 
  0.614
ALC62_02761
28S ribosomal protein S27, mitochondrial.
    
 0.573
ALC62_12558
Mitogen-activated protein-binding protein-interacting protein.
    
  0.536
ALC62_10354
BRCA1-associated RING domain protein 1.
    
 0.526
ALC62_07760
30S ribosomal protein S11, chloroplastic.
    
  0.526
ALC62_03945
28S ribosomal protein S2, mitochondrial.
   
  0.523
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.