STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_07670Very long-chain-fatty-acid--CoA ligase bubblegum. (666 aa)    
Predicted Functional Partners:
ALC62_12855
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.907
ALC62_11887
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.883
ALC62_08407
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.862
ALC62_04745
Carnitine O-palmitoyltransferase 1, muscle isoform.
     
 0.831
ALC62_01032
Ubiquitin-40S ribosomal protein S27a.
    
 0.821
ALC62_14343
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.816
ALC62_14937
Palmitoyl-protein thioesterase 1.
     
 0.803
ALC62_02723
Lysosomal thioesterase PPT2 like protein.
     
 0.803
ALC62_04037
Ubiquitin carboxyl-terminal hydrolase 7.
    
 0.802
ALC62_02613
Ubiquitin-60S ribosomal protein L40.
    
 0.784
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.