STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_07710Uncharacterized protein. (1921 aa)    
Predicted Functional Partners:
ALC62_13611
Uncharacterized protein.
   
 0.999
ALC62_14505
Nuclear pore protein.
   
 0.999
ALC62_13937
E3 SUMO-protein ligase RanBP2.
   
 0.999
ALC62_14518
Uncharacterized protein.
   
 0.997
ALC62_05160
Nuclear pore glycoprotein p62.
   
 0.997
ALC62_01698
Putative nucleoporin Nup54.
   
 0.997
ALC62_03615
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.995
ALC62_09330
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.994
ALC62_14709
Uncharacterized protein.
  
 0.993
ALC62_13417
Uncharacterized protein.
   
 0.992
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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