STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC62_05907Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (209 aa)    
Predicted Functional Partners:
ALC62_07306
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.893
ALC62_08798
Peptidyl-prolyl cis-trans isomerase D.
  
 
0.880
ALC62_12855
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 
 0.869
ALC62_09619
ADP,ATP carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.865
ALC62_03742
ADP,ATP carrier protein 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.865
ALC62_06131
Voltage-dependent anion-selective channel.
   
 0.862
ALC62_03615
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.858
ALC62_14058
Pre-mRNA-processing factor 19.
    
 0.850
ALC62_03569
Pre-mRNA-splicing factor SYF1.
    
 0.848
ALC62_09330
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.847
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.