STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_08316PAP2_C domain-containing protein. (330 aa)    
Predicted Functional Partners:
TRIUR3_14433
Ceramide kinase.
     
 0.882
TRIUR3_07446
Alkaline ceramidase 3.
     
 0.872
TRIUR3_29526
Uncharacterized protein.
     
 0.867
TRIUR3_19273
Sphingosine-1-phosphate phosphatase 1.
     
 0.846
TRIUR3_08171
Sphingolipid delta(4)-desaturase DES1.
   
 
 0.779
TRIUR3_08170
Sphingolipid delta(4)-desaturase DES1.
   
 
 0.779
TRIUR3_28048
Uncharacterized protein.
   
 
 0.721
TRIUR3_10256
Neutral ceramidase.
     
 0.713
TRIUR3_29289
Neutral ceramidase.
     
 0.713
TRIUR3_18936
Putative serine racemase.
     
 0.680
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.