STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_04197Putative NOT transcription complex subunit VIP2. (844 aa)    
Predicted Functional Partners:
TRIUR3_20235
Uncharacterized protein.
   
 0.985
TRIUR3_22950
CCR4-NOT transcription complex subunit 3.
    
0.980
TRIUR3_31614
CCR4-NOT transcription complex subunit 10.
   
 0.972
TRIUR3_13431
CCR4-NOT transcription complex subunit 4.
    
 0.971
TRIUR3_25459
General negative regulator of transcription subunit 4.
    
 0.971
TRIUR3_24904
CCR4-NOT transcription complex subunit 4.
    
 0.971
T1LSZ3_TRIUA
Uncharacterized protein.
    
 0.970
TRIUR3_29894
Endo/exonuclease/phosphatase domain-containing protein.
    
 0.960
TRIUR3_18641
Endo/exonuclease/phosphatase domain-containing protein.
    
 0.960
T1NHG9_TRIUA
Uncharacterized protein.
    
 0.960
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.