STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_28893GDSL esterase/lipase CPRD49. (260 aa)    
Predicted Functional Partners:
TRIUR3_04173
Uncharacterized protein.
  
 0.997
TRIUR3_14617
Apolipoprotein A-I-binding protein.
  
 
 0.954
TRIUR3_14616
Pyridoxine/pyridoxamine 5'-phosphate oxidase.
  
 
 0.954
T1N1F5_TRIUA
PNP_phzG_C domain-containing protein.
  
 
 0.954
T1LHN7_TRIUA
Uncharacterized protein.
    
 0.862
TRIUR3_27905
Glutamine amidotransferase type-1 domain-containing protein.
    
 0.860
TRIUR3_11461
Uncharacterized protein.
    
 0.860
TRIUR3_27325
Pyridoxal kinase.
   
 0.827
TRIUR3_21464
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. In the C-terminal section; belongs to the HisA/HisF family.
    
 0.826
TRIUR3_07469
Carbamoyl-phosphate synthase small chain.
     
 0.812
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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