STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_04648Uncharacterized protein. (174 aa)    
Predicted Functional Partners:
TRIUR3_21631
Zinc finger CCCH domain-containing protein 40.
   
 0.915
TRIUR3_07421
Transcription factor bHLH51.
    
 0.912
TRIUR3_21807
Transcription factor bHLH51.
    
 0.912
TRIUR3_12818
Transcription factor bHLH51.
    
 0.912
T1LY15_TRIUA
BHLH domain-containing protein.
    
 0.912
TRIUR3_06551
DUF4477 domain-containing protein.
    
 0.876
TRIUR3_16763
Uncharacterized protein.
    
 0.876
TRIUR3_06550
DUF4477 domain-containing protein.
    
 0.876
TRIUR3_03382
PX domain-containing protein.
    
 0.876
TRIUR3_05393
60S ribosomal protein L9.
    
 0.858
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.