STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_20534Cytokinin dehydrogenase 5. (544 aa)    
Predicted Functional Partners:
TRIUR3_14305
Malate synthase; Belongs to the malate synthase family.
  
 
 0.862
TRIUR3_28293
Ribosomal protein S14, mitochondrial.
    
 0.833
TRIUR3_34323
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial.
    
 0.833
TRIUR3_12490
2-hydroxyacyl-CoA lyase.
   
 0.828
TRIUR3_22832
Acetolactate synthase.
   
 0.828
TRIUR3_20842
Electron transfer flavoprotein subunit alpha, mitochondrial.
  
 
 0.814
TRIUR3_03392
BLACT_WH domain-containing protein.
    
 0.797
TRIUR3_25435
Putative hydroxyacylglutathione hydrolase 2, chloroplast; Belongs to the GST superfamily.
    
 0.797
TRIUR3_21663
Estradiol 17-beta-dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.792
TRIUR3_06618
Estradiol 17-beta-dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.792
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.