STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_00972Putative cadmium/zinc-transporting ATPase HMA1, chloroplastic. (715 aa)    
Predicted Functional Partners:
TRIUR3_10120
Copper chaperone for superoxide dismutase.
  
 0.991
TRIUR3_18185
Copper transport protein ATOX1.
    
 0.634
TRIUR3_04900
Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.
  
 
 0.590
TRIUR3_33756
Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.
  
 
 0.590
TRIUR3_04899
Laccase-8.
  
 
 0.590
TRIUR3_18420
Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.
  
 
 0.590
TRIUR3_28403
Laccase-15; Belongs to the multicopper oxidase family.
  
 
 0.590
TRIUR3_08218
Uncharacterized protein.
  
 
 0.590
TRIUR3_05839
Uncharacterized protein.
  
 
 0.590
TRIUR3_10751
Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.
  
 
 0.590
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.