STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_12328Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (631 aa)    
Predicted Functional Partners:
TRIUR3_28468
Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
   
 
 0.992
PURA-2
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP; Belongs to the pescadillo family.
   
 
 0.990
TRIUR3_05341
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 
 0.988
TRIUR3_14736
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
  
 
 0.988
TRIUR3_18474
Uncharacterized protein.
   
 
 0.988
TRIUR3_07667
Ribosome biogenesis GTPase A.
   
 
 0.986
TRIUR3_01433
Guanine nucleotide-binding protein-like 3-like protein.
   
 
 0.986
TRIUR3_14046
WD repeat-containing protein 74.
   
 
 0.986
TRIUR3_31884
Uncharacterized protein.
   
 
 0.986
T1LPC8_TRIUA
Uncharacterized protein.
   
 
 0.986
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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