STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_09514Protein DAMAGED DNA-BINDING 2. (572 aa)    
Predicted Functional Partners:
TRIUR3_25544
DNA excision repair protein ERCC-8.
    
 0.976
TRIUR3_27433
Uncharacterized protein.
     
 0.973
T1ML27_TRIUA
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.971
TRIUR3_08239
E3 ubiquitin-protein ligase COP1.
     
 0.960
TRIUR3_03958
DNA damage-binding protein 1.
    
 0.959
TRIUR3_22290
DNA repair protein complementing XP-C cells-like protein.
   
 0.959
T1MT17_TRIUA
Uncharacterized protein.
    
 0.959
T1N898_TRIUA
Uncharacterized protein.
    
 0.959
T1NFI0_TRIUA
Uncharacterized protein.
    
 0.959
TRIUR3_34378
COP9 signalosome complex subunit 5b.
    
 0.945
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.