STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_18963MADS-box transcription factor 50. (217 aa)    
Predicted Functional Partners:
TRIUR3_30834
Uncharacterized protein.
  
 
 
 0.601
TRIUR3_19156
Uncharacterized protein.
  
  
  0.550
T1NW13_TRIUA
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.536
TRIUR3_17062
Uncharacterized protein.
  
 
   0.529
T1MAW2_TRIUA
DUF569 domain-containing protein.
  
 
   0.528
TRIUR3_13922
TAXi_C domain-containing protein.
  
     0.523
TRIUR3_08587
Uncharacterized protein.
  
 
   0.516
TRIUR3_33863
Uncharacterized protein.
  
 
   0.516
TRIUR3_01672
Uncharacterized protein.
  
  
  0.515
TRIUR3_21239
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.514
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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