STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_01241Uncharacterized protein. (85 aa)    
Predicted Functional Partners:
TRIUR3_19581
PPC domain-containing protein.
  
     0.533
TRIUR3_01235
Uncharacterized protein.
  
     0.532
TRIUR3_30260
LEA_2 domain-containing protein.
  
     0.530
TRIUR3_34936
Uncharacterized protein.
  
     0.528
TRIUR3_24271
Ubiquitin-like domain-containing protein.
  
     0.528
TRIUR3_33832
Ubiquitin-like domain-containing protein.
  
     0.525
TRIUR3_23096
Uncharacterized protein.
  
     0.525
TRIUR3_18948
MADS-box transcription factor 1.
  
     0.524
TRIUR3_18916
Senescence domain-containing protein.
  
     0.524
T1M6E7_TRIUA
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.
  
     0.523
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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